JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0163.1 PLAG1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0164.1 Nr2e3 Mus musculus Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0165.1 Abd-B Drosophila melanogaster Homeo domain factors HOX
MA0166.1 Antp Drosophila melanogaster Homeo domain factors HOX
MA0167.1 Awh Drosophila melanogaster Homeo domain factors
MA0168.1 B-H1 Drosophila melanogaster Homeo domain factors HOX
MA0169.1 B-H2 Drosophila melanogaster Homeo domain factors HOX
MA0170.1 C15 Drosophila melanogaster Homeo domain factors
MA0171.1 CG11085 Drosophila melanogaster Homeo domain factors
MA0172.1 CG11294 Drosophila melanogaster Homeo domain factors
Showing 10 profiles of page 32 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.