JASPAR CORE

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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA2024.1 MYB63 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2025.1 MYB93 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2026.1 MYB108 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2027.1 MYB44 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2028.1 MYB49 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2029.1 MYB88 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2030.1 MYB96 Arabidopsis thaliana Tryptophan cluster factors Myb
MA2031.1 AT5G04760 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA2032.1 TRB1 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA2033.1 NAC038 Arabidopsis thaliana GCM domain factors NAC
Showing 10 profiles of page 241 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.