JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1942.1 ETV2::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1943.1 ETV2::HOXB13 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1944.1 ETV5::DRGX Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::Paired-related HD factors
MA1945.1 ETV5::FIGLA Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::Tal-related
MA1946.1 ETV5::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1947.1 ETV5::FOXO1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1948.1 ETV5::HOXA2 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1949.1 FLI1::DRGX Homo sapiens Homeo domain factors::Tryptophan cluster factors Paired-related HD factors::Ets-related
MA1950.1 FLI1::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1951.1 FOS Homo sapiens Basic leucine zipper factors (bZIP) Fos-related
Showing 10 profiles of page 233 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.