JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1758.1 HSFA1E Arabidopsis thaliana Heat shock factors
MA1759.1 HSFA4A Arabidopsis thaliana Heat shock factors
MA1760.1 HSFA6A Arabidopsis thaliana Heat shock factors
MA1761.1 HSFB3 Arabidopsis thaliana Heat shock factors
MA1762.1 MYB10 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1764.1 MYB116 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1765.1 MYB121 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1766.1 MYB17 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1767.1 MYB23 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1768.1 MYB30 Arabidopsis thaliana Tryptophan cluster factors Myb
Showing 10 profiles of page 215 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.