JASPAR CORE

  1. Home
  2. Collection CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0727.1 NR3C2 Homo sapiens Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA0728.1 Nr2F6 Mus musculus Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0729.1 RARA Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA0730.1 RARA Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA0731.1 BCL6B Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0732.1 EGR3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0733.1 EGR4 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0734.1 GLI2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0734.2 GLI2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0734.3 Gli2 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0735.1 GLIS1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0736.1 GLIS2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0737.1 GLIS3 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0738.1 HIC2 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0739.1 Hic1 Mus musculus C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0740.1 KLF14 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0740.2 KLF14 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0741.1 KLF16 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0742.1 Klf12 Mus musculus C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0742.2 KLF12 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0743.1 SCRT1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0743.2 SCRT1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0744.1 SCRT2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0744.2 SCRT2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0745.1 SNAI2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0745.2 SNAI2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0746.1 SP3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0746.2 SP3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0747.1 SP8 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0748.1 YY2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0748.2 YY2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0749.1 ZBED1 Homo sapiens C2H2 zinc finger factors BED zinc finger factors
MA0750.1 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0750.2 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0751.1 ZIC4 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0752.1 ZNF410 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0753.1 ZNF740 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0753.2 ZNF740 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0754.1 CUX1 Homo sapiens Homeo domain factors HD-CUT
MA0754.2 CUX1 Homo sapiens Homeo domain factors HD-CUT
MA0755.1 CUX2 Homo sapiens Homeo domain factors HD-CUT
MA0756.1 ONECUT2 Homo sapiens Homeo domain factors HD-CUT
MA0756.2 ONECUT2 Homo sapiens Homeo domain factors HD-CUT
MA0757.1 ONECUT3 Homo sapiens Homeo domain factors HD-CUT
MA0758.1 E2F7 Homo sapiens Fork head/winged helix factors E2F
MA0759.1 ELK3 Homo sapiens Tryptophan cluster factors Ets-related
MA0759.2 ELK3 Homo sapiens Tryptophan cluster factors Ets-related
MA0760.1 ERF Homo sapiens Tryptophan cluster factors Ets-related
MA0761.1 ETV1 Homo sapiens Tryptophan cluster factors Ets-related
MA0761.2 ETV1 Homo sapiens Tryptophan cluster factors Ets-related
Showing 50 profiles of page 21 from 49 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.