JASPAR CORE

  1. Home
  2. Collection CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1643.1 NFIB Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA1644.1 NFYC Homo sapiens Heteromeric CCAAT-binding factors Heteromeric CCAAT-binding
MA1645.1 NKX2-2 Homo sapiens Homeo domain factors NK
MA1646.1 OSR2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1647.1 PRDM4 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1647.2 Prdm4 Mus musculus C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1648.1 TCF12 Homo sapiens Basic helix-loop-helix factors (bHLH) E2A
MA1649.1 ZBTB12 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1650.1 ZBTB14 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1651.1 ZFP42 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 10 profiles of page 203 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.