JASPAR CORE

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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA1624.1 Stat5a Mus musculus STAT domain factors STAT factors
MA1625.1 Stat5b Mus musculus STAT domain factors STAT factors
MA1627.1 Wt1 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1628.1 Zic1::Zic2 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers::More than 3 adjacent zinc fingers
MA1629.1 Zic2 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1630.1 Znf281 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1630.2 ZNF281 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1631.1 ASCL1 Homo sapiens Basic helix-loop-helix factors (bHLH) MyoD/ASC-related factors
MA1632.1 ATF2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1633.1 BACH1 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
Showing 10 profiles of page 201 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.