JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1606.1 Foxf1 Mus musculus Fork head/winged helix factors FOX
MA1607.1 Foxl2 Mus musculus Fork head/winged helix factors FOX
MA1608.1 Isl1 Mus musculus Homeo domain factors HD-LIM
MA1615.1 Plagl1 Mus musculus C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1616.1 Prdm15 Mus musculus C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1618.1 Ptf1a Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1619.1 Ptf1A Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1620.1 Ptf1A Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1621.1 Rbpjl Mus musculus Rel homology region (RHR) factors CSL-related factors
MA1623.1 Stat2 Mus musculus STAT domain factors STAT factors
Showing 10 profiles of page 200 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.