JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1580.1 ZBTB32 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA1581.1 ZBTB6 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1583.1 ZFP57 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1584.1 ZIC5 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1585.1 ZKSCAN1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1587.1 ZNF135 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1588.1 ZNF136 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1589.1 ZNF140 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1592.1 ZNF274 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1593.1 ZNF317 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 10 profiles of page 198 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.