JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1507.1 HOXD4 Homo sapiens Homeo domain factors HOX
MA1508.1 IKZF1 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1509.1 IRF6 Homo sapiens Tryptophan cluster factors Interferon-regulatory factors
MA1511.1 KLF10 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1511.2 KLF10 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1512.1 KLF11 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1513.1 KLF15 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1514.1 KLF17 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1515.1 KLF2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1516.1 KLF3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
Showing 10 profiles of page 190 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.