JASPAR CORE

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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA1329.1 ZHD1 Arabidopsis thaliana Homeo domain factors PLINC
MA1329.2 ZHD1 Arabidopsis thaliana Homeo domain factors PLINC
MA1330.1 ZHD6 Arabidopsis thaliana Homeo domain factors PLINC
MA1331.1 BEH4 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) BES/BZR
MA1332.1 BEH2 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) BES/BZR
MA1333.1 BEH3 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) BES/BZR
MA1334.1 BZIP11 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group S
MA1335.1 TGA4 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
MA1336.1 TGA3 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
MA1337.1 BZIP44 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group S
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.