JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1076.1 WRKY15 Arabidopsis thaliana GCM domain factors WRKY
MA1076.2 WRKY15 Arabidopsis thaliana GCM domain factors WRKY
MA1077.1 WRKY18 Arabidopsis thaliana GCM domain factors WRKY
MA1078.1 WRKY2 Arabidopsis thaliana GCM domain factors WRKY
MA1079.1 WRKY21 Arabidopsis thaliana GCM domain factors WRKY
MA1079.2 WRKY21 Arabidopsis thaliana GCM domain factors WRKY
MA1080.1 WRKY23 Arabidopsis thaliana GCM domain factors WRKY
MA1081.1 WRKY25 Arabidopsis thaliana GCM domain factors WRKY
MA1081.2 WRKY25 Arabidopsis thaliana GCM domain factors WRKY
MA1083.1 WRKY30 Arabidopsis thaliana GCM domain factors WRKY
Showing 10 profiles of page 144 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.