JASPAR CORE

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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA0966.1 BIM3 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA0967.1 BZIP60 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group K
MA0968.1 BZIP68 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group G
MA0968.2 BZIP68 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group G
MA0969.1 CAMTA2 Arabidopsis thaliana CAMTA
MA0970.1 CAMTA3 Arabidopsis thaliana CAMTA
MA0971.1 DREB1A Arabidopsis thaliana AP2/EREBP ERF/DREB
MA0972.1 CCA1 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA0973.1 CDF2 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA0974.1 CDF3 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.