JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0748.2 YY2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0749.1 ZBED1 Homo sapiens C2H2 zinc finger factors BED zinc finger factors
MA0750.1 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0750.2 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0751.1 ZIC4 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0752.1 ZNF410 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA0753.1 ZNF740 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0753.2 ZNF740 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0754.1 CUX1 Homo sapiens Homeo domain factors HD-CUT
MA0754.2 CUX1 Homo sapiens Homeo domain factors HD-CUT
Showing 10 profiles of page 104 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.