Detailed information of matrix profile MA0052.3

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Profile summary
Name: MEF2A
Matrix ID: MA0052.3
Class: MADS box factors
Family: Regulators of differentiation
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25217591
Uniprot ID: Q02078  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 166 51 0 971 517 971 971 971 0 971 165 603 ]
C [ 86 971 9 3 0 2 0 4 2 2 5 368 ]
G [ 475 3 0 0 2 0 0 0 0 0 971 41 ]
T [ 496 51 971 4 454 155 51 39 971 1 12 95 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0052.1 MA0052 1 MEF2A Homo sapiens
Regulators of differentiation MADS box factors
MA0052.2 MA0052 2 MEF2A Homo sapiens
Regulators of differentiation MADS box factors
MA0052.3 MA0052 3 MEF2A Homo sapiens
Regulators of differentiation MADS box factors
MA0052.4 MA0052 4 MEF2A Homo sapiens
Regulators of differentiation MADS box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0060.1

ChIP-seq Centrality
log(P-value): -1924.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0060.1

ChIP-seq Centrality
log(P-value): -1879.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: