RSAT - matrix-clustering result

Analysis: JASPAR_2022_urochordates_UNVALIDATED (04/10/2021 19:33)

Command

matrix-clustering  -v 2 -matrix JASPAR_2022_urochordates_UNVALIDATED data/motifs/urochordates/JASPAR_2022_UNVALIDATED_urochordates.tf tf -hclust_method average -calc sum -title 'JASPAR 2022 urochordates UNVALIDATED' -metric_build_tree Ncor -lth w 5 -lth cor 0.6 -lth Ncor 0.4 -label_in_tree name -return json,heatmap -quick -o results/JASPAR_2022_matrix_clustering/urochordates/UNVALIDATED/interactive_trees/JASPAR_2022_matrix_clustering_urochordates_UNVALIDATED

Results Summary

Nb Input motifs

Nb Input collections

Nb Clusters Found

Download
Root motifs

Complete results [zip]

Parameters used

Linkage method ?

Similarity metric ?

Thresholds to partition the tree?

132

Download

Download

average

Ncor

Ncor = 0.4
cor = 0.6

Logo Forest (dynamic browsing)

Logo Forest (rapid overview - low image quality)

Clusters Summary

Clusters Summary Table

Cluster ID	# Motifs	Motif_Name::Collection	Number of Motifs by Collection	Root Motif (transfac Format)
cluster_1	36	ZF-C2H2-6::JASPAR_2022_urochordates_UNVALIDATED:: Otx::JASPAR_2022_urochordates_UNVALIDATED:: Pax3-7-like::JASPAR_2022_urochordates_UNVALIDATED:: Pou4::JASPAR_2022_urochordates_UNVALIDATED:: Cdx::JASPAR_2022_urochordates_UNVALIDATED:: Gsx::JASPAR_2022_urochordates_UNVALIDATED:: Nk-1::JASPAR_2022_urochordates_UNVALIDATED:: Msx::JASPAR_2022_urochordates_UNVALIDATED:: Bsx::JASPAR_2022_urochordates_UNVALIDATED:: Zfp298::JASPAR_2022_urochordates_UNVALIDATED:: Emx::JASPAR_2022_urochordates_UNVALIDATED:: Hox5::JASPAR_2022_urochordates_UNVALIDATED:: Otp::JASPAR_2022_urochordates_UNVALIDATED:: Isx::JASPAR_2022_urochordates_UNVALIDATED:: Prop::JASPAR_2022_urochordates_UNVALIDATED:: Atbf::JASPAR_2022_urochordates_UNVALIDATED:: Hnf1::JASPAR_2022_urochordates_UNVALIDATED:: Mnx::JASPAR_2022_urochordates_UNVALIDATED:: Hex::JASPAR_2022_urochordates_UNVALIDATED:: Nk-3::JASPAR_2022_urochordates_UNVALIDATED:: Hmbox1::JASPAR_2022_urochordates_UNVALIDATED:: Lmx-b::JASPAR_2022_urochordates_UNVALIDATED:: Uncx-b::JASPAR_2022_urochordates_UNVALIDATED:: Rax::JASPAR_2022_urochordates_UNVALIDATED:: Hox1::JASPAR_2022_urochordates_UNVALIDATED:: Lhx3/4::JASPAR_2022_urochordates_UNVALIDATED:: Tlx::JASPAR_2022_urochordates_UNVALIDATED:: Arid3::JASPAR_2022_urochordates_UNVALIDATED:: Pax6::JASPAR_2022_urochordates_UNVALIDATED:: Nkx3::JASPAR_2022_urochordates_UNVALIDATED:: Hox3::JASPAR_2022_urochordates_UNVALIDATED:: Noto::JASPAR_2022_urochordates_UNVALIDATED:: Hox4::JASPAR_2022_urochordates_UNVALIDATED:: Meox::JASPAR_2022_urochordates_UNVALIDATED:: Dlx-c::JASPAR_2022_urochordates_UNVALIDATED:: Dlx-b::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::36_motifs	Show matrix
cluster_2	8	Klf15::JASPAR_2022_urochordates_UNVALIDATED:: Klf3/8/12::JASPAR_2022_urochordates_UNVALIDATED:: Klf5-like::JASPAR_2022_urochordates_UNVALIDATED:: Klf6-7-like::JASPAR_2022_urochordates_UNVALIDATED:: Zfp161::JASPAR_2022_urochordates_UNVALIDATED:: Gli1-2-3::JASPAR_2022_urochordates_UNVALIDATED:: Glis::JASPAR_2022_urochordates_UNVALIDATED:: Zfp367::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::8_motifs	Show matrix
cluster_3	2	Meis::JASPAR_2022_urochordates_UNVALIDATED:: Pknox::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_4	17	SoxB1::JASPAR_2022_urochordates_UNVALIDATED:: SoxC::JASPAR_2022_urochordates_UNVALIDATED:: SoxB2::JASPAR_2022_urochordates_UNVALIDATED:: SoxF::JASPAR_2022_urochordates_UNVALIDATED:: FoxI-c::JASPAR_2022_urochordates_UNVALIDATED:: FoxO::JASPAR_2022_urochordates_UNVALIDATED:: FoxE::JASPAR_2022_urochordates_UNVALIDATED:: FoxI-a::JASPAR_2022_urochordates_UNVALIDATED:: FoxM::JASPAR_2022_urochordates_UNVALIDATED:: FoxG::JASPAR_2022_urochordates_UNVALIDATED:: FoxF::JASPAR_2022_urochordates_UNVALIDATED:: FoxI-b::JASPAR_2022_urochordates_UNVALIDATED:: FoxK::JASPAR_2022_urochordates_UNVALIDATED:: FoxD-b::JASPAR_2022_urochordates_UNVALIDATED:: FoxL2::JASPAR_2022_urochordates_UNVALIDATED:: FoxA-a::JASPAR_2022_urochordates_UNVALIDATED:: FoxQ::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::17_motifs	Show matrix
cluster_5	7	Fli-Erg-b::JASPAR_2022_urochordates_UNVALIDATED:: Fli-Erg-a::JASPAR_2022_urochordates_UNVALIDATED:: Etv1/4/5::JASPAR_2022_urochordates_UNVALIDATED:: Fli-Erg-c::JASPAR_2022_urochordates_UNVALIDATED:: Erf-a::JASPAR_2022_urochordates_UNVALIDATED:: Elf3-5::JASPAR_2022_urochordates_UNVALIDATED:: Elk1-3-4::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::7_motifs	Show matrix
cluster_6	2	large-Maf::JASPAR_2022_urochordates_UNVALIDATED:: small-Maf::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_7	11	Hes-c::JASPAR_2022_urochordates_UNVALIDATED:: Hes-b::JASPAR_2022_urochordates_UNVALIDATED:: Hey::JASPAR_2022_urochordates_UNVALIDATED:: Max::JASPAR_2022_urochordates_UNVALIDATED:: Mitf::JASPAR_2022_urochordates_UNVALIDATED:: Usf::JASPAR_2022_urochordates_UNVALIDATED:: Creb3l1-2::JASPAR_2022_urochordates_UNVALIDATED:: xBP-b::JASPAR_2022_urochordates_UNVALIDATED:: xBP-c::JASPAR_2022_urochordates_UNVALIDATED:: xBP-a::JASPAR_2022_urochordates_UNVALIDATED:: Creb3l3-4::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::11_motifs	Show matrix
cluster_8	4	Six1-2::JASPAR_2022_urochordates_UNVALIDATED:: Six3/6::JASPAR_2022_urochordates_UNVALIDATED:: GATA-a::JASPAR_2022_urochordates_UNVALIDATED:: GATA1/2/3::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::4_motifs	Show matrix
cluster_9	6	Nfil3-b::JASPAR_2022_urochordates_UNVALIDATED:: Tef-Hlf::JASPAR_2022_urochordates_UNVALIDATED:: Creb1::JASPAR_2022_urochordates_UNVALIDATED:: Atf4-5::JASPAR_2022_urochordates_UNVALIDATED:: Fos-b::JASPAR_2022_urochordates_UNVALIDATED:: Atf3-like::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::6_motifs	Show matrix
cluster_10	4	Snail::JASPAR_2022_urochordates_UNVALIDATED:: Tcf3-4-12::JASPAR_2022_urochordates_UNVALIDATED:: AP4::JASPAR_2022_urochordates_UNVALIDATED:: Atoh7::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::4_motifs	Show matrix
cluster_11	3	Sall-b::JASPAR_2022_urochordates_UNVALIDATED:: FoxA-b::JASPAR_2022_urochordates_UNVALIDATED:: FoxB::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::3_motifs	Show matrix
cluster_12	5	Tbx15/18/22::JASPAR_2022_urochordates_UNVALIDATED:: Tbx2/3::JASPAR_2022_urochordates_UNVALIDATED:: Tbox-a::JASPAR_2022_urochordates_UNVALIDATED:: Brachyury::JASPAR_2022_urochordates_UNVALIDATED:: Tbox-b::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::5_motifs	Show matrix
cluster_13	2	Mef2::JASPAR_2022_urochordates_UNVALIDATED:: Srf::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_14	2	NFkb::JASPAR_2022_urochordates_UNVALIDATED:: Rel::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_15	2	HNF4::JASPAR_2022_urochordates_UNVALIDATED:: NR2C1-2::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_16	2	Zbtb7::JASPAR_2022_urochordates_UNVALIDATED:: Cebpg::JASPAR_2022_urochordates_UNVALIDATED::	JASPAR_2022_urochordates_UNVALIDATED::2_motifs	Show matrix
cluster_17	1	Nkx2-3-5-6::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_18	1	ZF-C2H2-10::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_19	1	ZF-C2H2-7::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_20	1	Hsf1-2-4::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_21	1	Bcl6::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_22	1	Osr1-2-b::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_23	1	ZF-C2H2-1::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_24	1	p53-a::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_25	1	ESRR::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_26	1	YY1-2::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_27	1	Pax2-5-8-a::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_28	1	E2f1/2/3/6::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_29	1	ZF-C2H2-15::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_30	1	Prox-a::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_31	1	Mesp-Msgn::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_32	1	ZF-C2H2-35::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_33	1	Irf-b::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_34	1	Macho-1::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix
cluster_35	1	AP2-b::JASPAR_2022_urochordates_UNVALIDATED	JASPAR_2022_urochordates_UNVALIDATED : 1 motif	Show matrix

Note: by default the table displays the first 50 clusters. Click on the Show X entries button to display more (or less) clusters.
Click on the column names to change the order of the data.
Use the Search window to find your motif (s) of interest.

Individual Cluster View

Individual Cluster View

Show All

Hide All

cluster_1

cluster_2

cluster_3

cluster_4

cluster_5

cluster_6

cluster_7

cluster_8

cluster_9

cluster_10

cluster_11

cluster_12

cluster_13

cluster_14

cluster_15

cluster_16

cluster_17

cluster_18

cluster_19

cluster_20

cluster_21

cluster_22

cluster_23

cluster_24

cluster_25

cluster_26

cluster_27

cluster_28

cluster_29

cluster_30

cluster_31

cluster_32

cluster_33

cluster_34

cluster_35

Display Logo Trees

cluster_1

cluster_2

cluster_3

cluster_4

cluster_5

cluster_6

cluster_7

cluster_8

cluster_9

cluster_10

cluster_11

cluster_12

cluster_13

cluster_14

cluster_15

cluster_16

cluster_17

cluster_18

cluster_19

cluster_20

cluster_21

cluster_22

cluster_23

cluster_24

cluster_25

cluster_26

cluster_27

cluster_28

cluster_29

cluster_30

cluster_31

cluster_32

cluster_33

cluster_34

cluster_35

Display Branch-Motifs

Each cluster has a different color.
Click on the upper buttons to display separately the information of each cluster.
Click on the circles at each tree to display its corresponding merged motifs.

Definitions

Logo tree.
This results shows the hierarchical tree with its logo alignment of one cluster.
The logos are shown in Forward (left logo) and Reverse (right logo) orientation.
Branch-motifs.
On the trees are displayed the branch number that is the number in which the motifs were incorporated in the tree.
The Branch-Motifs table shows the logo in both orientations and the link to the file in TRANSFAC format with the branch-motif.

Individual Motif View

Individual Motif View

Motif id	Motif name	Cluster	Collection	Width	IC	Number of sites	Consensus	Consensus (Rev)
JASPAR_2022_urochordates_UNVALIDATED_m85_MA1926_1	Usf	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	8.02	1001	+++ahwrrtCACGTGayhwrawa+	+TWTYWDRTCACGTGAYYWDT+++
JASPAR_2022_urochordates_UNVALIDATED_m107_UN0459_1	NR2C1-2	cluster_15	JASPAR_2022_urochordates_UNVALIDATED	23	9.14	1001	+rycywTrACCTTTGAcCyywsm	KSWRRGGTCAAAGGTYAWRGRY+
JASPAR_2022_urochordates_UNVALIDATED_m109_UN0461_1	p53-a	cluster_24	JASPAR_2022_urochordates_UNVALIDATED	22	9.11	1001	mygycyrGRCwTGCCCrrrcmy	RKGYYYGGGCAWGYCYRGRCRK
JASPAR_2022_urochordates_UNVALIDATED_m9_MA1850_1	Dlx-b	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.70	1001	+WWWWWRSGGTAATTAYCSYHWW+	+wwdrsgrTAATTAccsywwwww+
JASPAR_2022_urochordates_UNVALIDATED_m65_MA1906_1	Noto	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.40	1001	+++WWWWWVMTCATTARYWWWWW+	+wwwwwryTAATgAkbwwwww+++
JASPAR_2022_urochordates_UNVALIDATED_m16_MA1857_1	Fli-Erg-c	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	5.51	1001	++WTTTYRYTTCCGGWWKTKKT+	+ammamwwCCGGAAryraaaw++
JASPAR_2022_urochordates_UNVALIDATED_m116_UN0468_1	Sall-b	cluster_11	JASPAR_2022_urochordates_UNVALIDATED	22	5.62	1001	+WWWWWWWTAATATDYWWWWW+	+wwwwwrhATATTAwwwwwww+
JASPAR_2022_urochordates_UNVALIDATED_m99_UN0451_1	Gli1-2-3	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	6.34	1001	+KSKKBGTGGGTGGTCKKBKBKK	mmvmvmmGaCCACCCacvmmsm+
JASPAR_2022_urochordates_UNVALIDATED_m13_MA1854_1	Etv1/4/5	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	5.44	1001	++rssbyryTTCCGGwmsycmc+	+GKGRSKWCCGGAARYRVSSY++
JASPAR_2022_urochordates_UNVALIDATED_m87_UN0439_1	AP2-b	cluster_35	JASPAR_2022_urochordates_UNVALIDATED	20	6.44	1001	vywtysCCCCAGGssawaas	STTWTSSCCTGGGGSRAWRB
JASPAR_2022_urochordates_UNVALIDATED_m88_UN0440_1	Arid3	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.16	1001	++wwwwwwwTTAATTwwwwwww++	++WWWWWWWAATTAAWWWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m63_MA1904_1	Nk-3	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.78	1001	++wwwttaaTTAATTrrtwwww++	++WWWWAYYAATTAATTAAWWW++
JASPAR_2022_urochordates_UNVALIDATED_m130_UN0482_1	Zfp161	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	9.02	1001	+GGGGKKKGGGGGSGCGGGGGGG	cccccccgCsCCCCCmmmcccC+
JASPAR_2022_urochordates_UNVALIDATED_m129_UN0481_1	ZF-C2H2-7	cluster_19	JASPAR_2022_urochordates_UNVALIDATED	22	8.86	1001	gwywdaCATTgAAGTCmywycy	RGRWRKGACTTCAATGTHWRWC
JASPAR_2022_urochordates_UNVALIDATED_m40_MA1881_1	Hmbox1	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.67	1001	++ddwwwawTTAATTaawtttt++	++AAAAWTTAATTAAWTWWWHH++
JASPAR_2022_urochordates_UNVALIDATED_m123_UN0475_1	Zbtb7	cluster_16	JASPAR_2022_urochordates_UNVALIDATED	20	7.25	1000	WKSMATGCATGCAWKHAWKS	smwtdmwTGCATgcatksmw
JASPAR_2022_urochordates_UNVALIDATED_m122_UN0474_1	xBP-c	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	6.97	1001	+++kkkgrwsACGTGTmcybtss+	+SSAVRGKACACGTSWYCMMM+++
JASPAR_2022_urochordates_UNVALIDATED_m43_MA1884_1	Hox3	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.87	1001	+++WWWWWWATCATTAWYWWWWW+	+wwwwwrwTAATgAtwwwwww+++
JASPAR_2022_urochordates_UNVALIDATED_m115_UN0467_1	Prox-a	cluster_30	JASPAR_2022_urochordates_UNVALIDATED	20	6.53	1001	rrrhkycTTAAGAydyyyym	KRRRRHRTCTTAAGRMDYYY
JASPAR_2022_urochordates_UNVALIDATED_m72_MA1913_1	small-Maf	cluster_6	JASPAR_2022_urochordates_UNVALIDATED	20	6.62	1001	kdrwwwwTGCTGAykyarsm	KSYTRMRTCAGCAWWWWYHM
JASPAR_2022_urochordates_UNVALIDATED_m58_MA1899_1	Mitf	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	6.71	1001	+++ssvmrtCACGTGAysysccs+	+SGGSRSRTCACGTGAYKBSS+++
JASPAR_2022_urochordates_UNVALIDATED_m60_MA1901_1	Msx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.89	1001	+++wwwtrrkTAATTrsktwwww+	+WWWWAMSYAATTAMYYAWWW+++
JASPAR_2022_urochordates_UNVALIDATED_m124_UN0476_1	ZF-C2H2-1	cluster_23	JASPAR_2022_urochordates_UNVALIDATED	20	8.46	1001	aaTrhwyAGTAGgsmvrmyh	DRKYBKSCCTACTRWDYATT
JASPAR_2022_urochordates_UNVALIDATED_m113_UN0465_1	Pknox	cluster_3	JASPAR_2022_urochordates_UNVALIDATED	20	5.76	1001	rrmmrdyTGACAgsygkcmm	KKGMCRSCTGTCARHYKKYY
JASPAR_2022_urochordates_UNVALIDATED_m101_UN0453_1	HNF4	cluster_15	JASPAR_2022_urochordates_UNVALIDATED	23	11.17	1001	gracttTGGACTTTGrmCyytk+	+MARRGKYCAAAGTCCAAAGTYC
JASPAR_2022_urochordates_UNVALIDATED_m97_UN0449_1	Elk1-3-4	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	6.48	1001	RRRRSSYACTTCCGGHWVYCCY+	+rggrbwdCCGGAAgtrssyyyy
JASPAR_2022_urochordates_UNVALIDATED_m111_UN0463_1	Pax3-7-like	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.59	1001	+WWAAWWAATCAATTWWTWWW+++	+++wwwawwaATTGATtwwttww+
JASPAR_2022_urochordates_UNVALIDATED_m92_UN0444_1	Cdx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.25	1001	++wwwwwdwTTTATtGckkkdwdd	HHWHMMMGCAATAAAWHWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m89_UN0441_1	Atf3-like	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	6.85	1001	+mvrrbgrTGACGTmaycskk++	++MMSGRTKACGTCAYCVYYBK+
JASPAR_2022_urochordates_UNVALIDATED_m33_MA1874_1	GATA-a	cluster_8	JASPAR_2022_urochordates_UNVALIDATED	20	5.87	1001	wwwwwrctGATAAsrwawhh	DDWTWYSTTATCAGYWWWWW
JASPAR_2022_urochordates_UNVALIDATED_m8_MA1849_1	Creb1	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	10.97	1001	+AAAKYTRTGACGTCAYARMTTT	aaakytrTGACGTCAyarmttt+
JASPAR_2022_urochordates_UNVALIDATED_m52_MA1893_1	Klf6-7-like	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	9.06	1001	+ccccvcCACrCCCmmccccc++	++GGGGGKKGGGYGTGGBGGGG+
JASPAR_2022_urochordates_UNVALIDATED_m18_MA1859_1	FoxA-a	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	10.73	1001	++++WKBBWTTGTTTACWTARKGM	kcmyTAwGTAAACAAwvvmw++++
JASPAR_2022_urochordates_UNVALIDATED_m47_MA1888_1	Irf-b	cluster_33	JASPAR_2022_urochordates_UNVALIDATED	22	11.09	1001	GAdActrgAGTwTCGyttykyk	MRMRAARCGAWACTCYAGTHTC
JASPAR_2022_urochordates_UNVALIDATED_m69_MA1910_1	Rax	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.18	1001	++wwwtwaaTTAATTrrwtwww++	++WWWAWYYAATTAATTWAWWW++
JASPAR_2022_urochordates_UNVALIDATED_m132_UN0484_1	Zfp367	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	6.79	1001	+mmmmmmmgaCCCCCCmcmmmsm	KSKKKGKGGGGGGTCKKKKKKK+
JASPAR_2022_urochordates_UNVALIDATED_m128_UN0480_1	ZF-C2H2-6	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	7.66	1001	KRRDWRKGTTCAATTAAWTTWW++	++wwaawTtAATTGAACmywhyym
JASPAR_2022_urochordates_UNVALIDATED_m102_UN0454_1	Mef2	cluster_13	JASPAR_2022_urochordates_UNVALIDATED	20	5.96	1001	ddkmccrATTTGGrwhhwww	WWWDDWYCCAAATYGGKMHH
JASPAR_2022_urochordates_UNVALIDATED_m30_MA1871_1	FoxM	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.58	1001	++KTTKTTTTTGTTTKTTTTTK++	++maaaaamAAACAAaaamaam++
JASPAR_2022_urochordates_UNVALIDATED_m46_MA1887_1	Hsf1-2-4	cluster_20	JASPAR_2022_urochordates_UNVALIDATED	20	9.20	1001	tmGAaydTTCTAGAAhdttc	GAAHDTTCTAGAAHRTTCKA
JASPAR_2022_urochordates_UNVALIDATED_m31_MA1872_1	FoxO	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	6.79	1001	++wrwaaacATGTTTwyktttw++	++WAAAMRWAAACATGTTTWYW++
JASPAR_2022_urochordates_UNVALIDATED_m71_MA1912_1	Six3/6	cluster_8	JASPAR_2022_urochordates_UNVALIDATED	20	5.93	1001	wtgwawwTGATACssywhwh	DWDWRSSGTATCAWWTWCAW
JASPAR_2022_urochordates_UNVALIDATED_m34_MA1875_1	GATA1/2/3	cluster_8	JASPAR_2022_urochordates_UNVALIDATED	20	5.56	1001	wwwdwwraGATAAgmwwwww	WWWWWKCTTATCTYWWHWWW
JASPAR_2022_urochordates_UNVALIDATED_m94_UN0446_1	Creb3l3-4	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	7.36	1001	+dddgkgrTGACGTGgmmgkttt+	+AAAMCKKCCACGTCAYCMCHHH+
JASPAR_2022_urochordates_UNVALIDATED_m57_MA1898_1	Meox	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.86	1001	+++WWWWWRRTMATTAATWWWWW+	+wwwwwatTAATkAyywwwww+++
JASPAR_2022_urochordates_UNVALIDATED_m80_MA1921_1	Tbx15/18/22	cluster_12	JASPAR_2022_urochordates_UNVALIDATED	23	8.33	1001	GGTGWBATCACACCTYYCMYMM+	+kkrkgrrAGGTGTgAtvwCaCc
JASPAR_2022_urochordates_UNVALIDATED_m23_MA1864_1	FoxF	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.07	1001	+++DTKTRWWTRTTTATWTWWWW+	+wwwwawaTAAAyAwwyamah+++
JASPAR_2022_urochordates_UNVALIDATED_m74_MA1915_1	SoxB1	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.27	1001	WMMAAWAACAATGWHAWTKK++++	++++mmAwtdwcATTGTtwttkkw
JASPAR_2022_urochordates_UNVALIDATED_m59_MA1900_1	Mnx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.04	1001	++wwwwwwwtTAATTrawwwww++	++WWWWWTYAATTAAWWWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m56_MA1897_1	Max	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	6.61	1001	++KGKTDRMCACGTGKYHAMCM++	++kgktdrmCACGTGkyhamcm++
JASPAR_2022_urochordates_UNVALIDATED_m114_UN0466_1	Pou4	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.92	1001	+atwawthATAAATwawthat+++	+++ATDAWTWATTTATDAWTWAT+
JASPAR_2022_urochordates_UNVALIDATED_m91_UN0443_1	Bcl6	cluster_21	JASPAR_2022_urochordates_UNVALIDATED	22	9.53	1001	mmmmmygCtTTCgAGGAAtyyy	RRRATTCCTCGAAAGCRKKKKK
JASPAR_2022_urochordates_UNVALIDATED_m90_UN0442_1	Atf4-5	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	8.04	1001	RRWGGMTGACGTCATCCWYWWY+	+rwwrwggaTGACGTCAkccwyy
JASPAR_2022_urochordates_UNVALIDATED_m3_MA1844_1	Atbf	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.97	1001	++wwwwwaatTAATTamwwwww++	++WWWWWKTAATTAATTWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m76_MA1917_1	SoxC	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	5.09	1001	+WWWAAAAAACAATDAWWWWK+++	+++mwwwwthATTGTTttttwww+
JASPAR_2022_urochordates_UNVALIDATED_m73_MA1914_1	Snail	cluster_10	JASPAR_2022_urochordates_UNVALIDATED	21	7.21	1001	KKKGKDRCAGGTGYRBKKKK+	+mmmmvyrCACCTGyhmcmmm
JASPAR_2022_urochordates_UNVALIDATED_m62_MA1903_1	Nk-1	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.09	1001	+++DKKKKKTTAATTGRWWWWWD+	+hwwwwwyCAATTAammmmmh+++
JASPAR_2022_urochordates_UNVALIDATED_m44_MA1885_1	Hox4	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.95	1001	+++wwwwwraTmATTAwykwwww+	+WWWWMRWTAATKATYWWWWW+++
JASPAR_2022_urochordates_UNVALIDATED_m24_MA1865_1	FoxG	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	5.44	1001	+++kkkkkkkTGTTTGtkkkkkk+	+MMMMMMACAAACAMMMMMMM+++
JASPAR_2022_urochordates_UNVALIDATED_m4_MA1845_1	Atoh7	cluster_10	JASPAR_2022_urochordates_UNVALIDATED	21	6.70	1001	+gvryraCAGCTGTyrybscs	SGSVRYRACAGCTGTYRYBC+
JASPAR_2022_urochordates_UNVALIDATED_m37_MA1878_1	Hes-c	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	5.98	1001	cgygyswggCGCGTGysdbrcr++	++YGYVHSRCACGCGCCWSRCRCG
JASPAR_2022_urochordates_UNVALIDATED_m118_UN0470_1	Srf	cluster_13	JASPAR_2022_urochordates_UNVALIDATED	20	6.05	1001	tkkccawATATGGkvwkrth	DAYMWBMCCATATWTGGMMA
JASPAR_2022_urochordates_UNVALIDATED_m110_UN0462_1	Pax2-5-8-a	cluster_27	JASPAR_2022_urochordates_UNVALIDATED	22	6.84	1001	yagtsawGCGTgACGstymmss	SSKKRASCGTCACGCWTSACTR
JASPAR_2022_urochordates_UNVALIDATED_m42_MA1883_1	Hox1	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.08	1001	++wwwwwwwTTAATTawwwwww++	++WWWWWWTAATTAAWWWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m61_MA1902_1	NFkb	cluster_14	JASPAR_2022_urochordates_UNVALIDATED	22	7.63	1001	vmaaarGGGGAATcCCCctwyy	RRWAGGGGGATTCCCCYTTTKB
JASPAR_2022_urochordates_UNVALIDATED_m67_MA1908_1	Otx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.68	1001	++DWWWWWKCGGATTAAKBYKWWW	wwwmrvmtTAATCCgmwwwwwh++
JASPAR_2022_urochordates_UNVALIDATED_m15_MA1856_1	Fli-Erg-b	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	7.26	1001	+MMCCVAAACCGGAARYRVRRHY	rdyybyryTTCCGGtttbggkk+
JASPAR_2022_urochordates_UNVALIDATED_m121_UN0473_1	xBP-b	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	6.81	1001	+++ktrgwhyACGTGkwmyamsk+	+MSKTRKWMCACGTRDWCYAM+++
JASPAR_2022_urochordates_UNVALIDATED_m20_MA1861_1	FoxB	cluster_11	JASPAR_2022_urochordates_UNVALIDATED	22	9.05	1001	HWAWRYMAATATTTRCWTWWKD	hmwwawgYAAATATTkrywtwd
JASPAR_2022_urochordates_UNVALIDATED_m7_MA1848_1	Cebpg	cluster_16	JASPAR_2022_urochordates_UNVALIDATED	20	5.28	1001	rrvmrrtATTGCAhyahwky	RMWDTRDTGCAATAYYKBYY
JASPAR_2022_urochordates_UNVALIDATED_m104_UN0456_1	Mesp-Msgn	cluster_31	JASPAR_2022_urochordates_UNVALIDATED	22	10.64	1001	arwdgAACATATGTTcmwytym	KRARWKGAACATATGTTCHWYT
JASPAR_2022_urochordates_UNVALIDATED_m53_MA1894_1	large-Maf	cluster_6	JASPAR_2022_urochordates_UNVALIDATED	20	6.62	1001	wwwwwwwTGCTGAckhagca	TGCTDMGTCAGCAWWWWWWW
JASPAR_2022_urochordates_UNVALIDATED_m96_UN0448_1	Elf3-5	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	6.58	1001	mccmhcyACTTCCGcmwmmmmm+	+KKKKKWKGCGGAAGTRGDKGGK
JASPAR_2022_urochordates_UNVALIDATED_m36_MA1877_1	Hes-b	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	5.80	1000	sgsgggtGgCACGTGycwgkcg++	++CGMCWGRCACGTGCCACCCSCS
JASPAR_2022_urochordates_UNVALIDATED_m25_MA1866_1	FoxI-a	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.24	1001	++KKKKKKTTTGTTTDTKTTTT++	++aaaamahAAACAAammmmmm++
JASPAR_2022_urochordates_UNVALIDATED_m45_MA1886_1	Hox5	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.24	1001	+++wwwwwrtTAATTGsttwtww+	+WWAWAASCAATTAAYWWWWW+++
JASPAR_2022_urochordates_UNVALIDATED_m108_UN0460_1	Osr1-2-b	cluster_22	JASPAR_2022_urochordates_UNVALIDATED	20	6.93	1001	ggctaccRGTAGCwryhggk	MCCDRYWGCTACYGGTAGCC
JASPAR_2022_urochordates_UNVALIDATED_m2_MA1843_1	AP4	cluster_10	JASPAR_2022_urochordates_UNVALIDATED	21	8.71	1001	+gwwrawCAGCTGathawcar	YTGWTDATCAGCTGWTYWWC+
JASPAR_2022_urochordates_UNVALIDATED_m29_MA1870_1	FoxL2	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.12	1001	+++KTKTKTTTGTTTATWTWWWT+	+awwwawaTAAACAaamamam+++
JASPAR_2022_urochordates_UNVALIDATED_m93_UN0445_1	Creb3l1-2	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	8.68	1001	++++VMRAMDTGCCACGTSRCMAH	dtkgysACGTGGCahktykb++++
JASPAR_2022_urochordates_UNVALIDATED_m78_MA1919_1	Tbox-a	cluster_12	JASPAR_2022_urochordates_UNVALIDATED	23	6.51	1001	+SCMMMMWTTCACACCYYCMCCC	gggkgrrGGTGTGAawkkkkgs+
JASPAR_2022_urochordates_UNVALIDATED_m103_UN0455_1	Meis	cluster_3	JASPAR_2022_urochordates_UNVALIDATED	20	5.40	1001	rrmarrtTGACAgsykkcmm	KKGMMRSCTGTCAAYYTKYY
JASPAR_2022_urochordates_UNVALIDATED_m98_UN0450_1	ESRR	cluster_25	JASPAR_2022_urochordates_UNVALIDATED	20	9.69	1001	tcawyycAAGGTCAwgtcmA	TKGACWTGACCTTGRRWTGA
JASPAR_2022_urochordates_UNVALIDATED_m22_MA1863_1	FoxE	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	6.01	1001	++ddwkkkkTTGTTTwtwtwrk++	++MYWAWAWAAACAAMMMMWHH++
JASPAR_2022_urochordates_UNVALIDATED_m28_MA1869_1	FoxK	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	6.17	1001	+++kkkkktkTGTTTaywtwtww+	+WWAWAWRTAAACAMAMMMMM+++
JASPAR_2022_urochordates_UNVALIDATED_m38_MA1879_1	Hex	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.07	1001	++wwwwywaTTAATTrmtwwww++	++WWWWAKYAATTAATWRWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m79_MA1920_1	Tbox-b	cluster_12	JASPAR_2022_urochordates_UNVALIDATED	23	7.09	1001	cyytwrrAGGTGygAawwwymm+	+KKRWWWTTCRCACCTYYWARRG
JASPAR_2022_urochordates_UNVALIDATED_m127_UN0479_1	ZF-C2H2-35	cluster_32	JASPAR_2022_urochordates_UNVALIDATED	22	10.13	1001	awgcAAcCTCGgTtCCAwarav	BTYTWTGGAACCGAGGTTGCWT
JASPAR_2022_urochordates_UNVALIDATED_m35_MA1876_1	Gsx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	8.00	1001	+AtkrswwtTTAATtrshwwT+++	+++AWWDSYAATTAAAWWSYMAT+
JASPAR_2022_urochordates_UNVALIDATED_m11_MA1852_1	Emx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.24	1001	+++wwttdryTAATTGrkkwwww+	+WWWWMMYCAATTARYHAAWW+++
JASPAR_2022_urochordates_UNVALIDATED_m77_MA1918_1	SoxF	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	6.48	1001	+awwwwyhATTGTthtttwww+++	+++WWWAAADAACAATDRWWWWT+
JASPAR_2022_urochordates_UNVALIDATED_m126_UN0478_1	ZF-C2H2-15	cluster_29	JASPAR_2022_urochordates_UNVALIDATED	20	6.94	1001	amaaamrAGAGAGmrmrgcs	SGCYKYKCTCTCTYKTTTKT
JASPAR_2022_urochordates_UNVALIDATED_m70_MA1911_1	Rel	cluster_14	JASPAR_2022_urochordates_UNVALIDATED	22	7.17	1001	+kkkkkkgGGAATTyccsydk+	+MHRSGGRAATTCCCMMMMMM+
JASPAR_2022_urochordates_UNVALIDATED_m39_MA1880_1	Hey	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	6.78	1001	SSSVSGBGGCACGTGYCSSSSS++	++sssssgrCACGTGccvcsbsss
JASPAR_2022_urochordates_UNVALIDATED_m64_MA1905_1	Nkx3	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.05	1001	++wwwwtmaTTAATTrvkdwww++	++WWWHMBYAATTAATKAWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m131_UN0483_1	Zfp298	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.36	1001	+++wwkksgtTAATTGsykwwww+	+WWWWMRSCAATTAACSMMWW+++
JASPAR_2022_urochordates_UNVALIDATED_m68_MA1909_1	Prop	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.37	1001	++ddttwawTTAATTwrattwm++	++KWAATYWAATTAAWTWAAHH++
JASPAR_2022_urochordates_UNVALIDATED_m48_MA1889_1	Isx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.96	1001	++wwwtwawTTAATTarattww++	++WWAATYTAATTAAWTWAWWW++
JASPAR_2022_urochordates_UNVALIDATED_m14_MA1855_1	Fli-Erg-a	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	6.42	1001	++KKBKBRYTTCCGGWRGKGVR+	+ybcmcywCCGGAAryvmvmm++
JASPAR_2022_urochordates_UNVALIDATED_m49_MA1890_1	Klf15	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	10.26	1001	GKKKGGGGGGGYGTGKSGGGGG+	+cccccsmCACrCCCCcccmmmc
JASPAR_2022_urochordates_UNVALIDATED_m81_MA1922_1	Tbx2/3	cluster_12	JASPAR_2022_urochordates_UNVALIDATED	23	7.68	1001	++KKKKAWWTCACACCTYYTTY+	+raarrAgGTGTgAwwtmmmm++
JASPAR_2022_urochordates_UNVALIDATED_m17_MA1858_1	Fos-b	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	11.10	1001	+kwmasdATGACGTCAThctk++	++MAGDATGACGTCATHSTKWM+
JASPAR_2022_urochordates_UNVALIDATED_m120_UN0472_1	xBP-a	cluster_7	JASPAR_2022_urochordates_UNVALIDATED	24	8.29	1001	++wwwtgrtgACGTGkccwwww++	++WWWWGGMCACGTCAYCAWWW++
JASPAR_2022_urochordates_UNVALIDATED_m86_MA1927_1	YY1-2	cluster_26	JASPAR_2022_urochordates_UNVALIDATED	22	10.41	1001	srgcsgCCATwATGGcggcyby	RVRGCCGCCATWATGGCSGCYS
JASPAR_2022_urochordates_UNVALIDATED_m5_MA1846_1	Brachyury	cluster_12	JASPAR_2022_urochordates_UNVALIDATED	23	6.51	1001	mrcrcrtAgGTGTGAawtttsg+	+CSAAAWTTCACACCTAYGYGYK
JASPAR_2022_urochordates_UNVALIDATED_m12_MA1853_1	Erf-a	cluster_5	JASPAR_2022_urochordates_UNVALIDATED	23	6.19	1001	TTTTKKYACTTCCGKTYYYY+++	+++rrrramcGGAAGTrmmaaaa
JASPAR_2022_urochordates_UNVALIDATED_m26_MA1867_1	FoxI-b	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	8.34	1001	+++wtkttwwTGTTTAywwwaha+	+TDTWWWRTAAACAWWAAMAW+++
JASPAR_2022_urochordates_UNVALIDATED_m50_MA1891_1	Klf3/8/12	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	9.75	1001	+KGGKKKTGGGYGTGGYMKKK++	++mmmkrCCACrCCCammmccm+
JASPAR_2022_urochordates_UNVALIDATED_m10_MA1851_1	Dlx-c	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.50	1001	+wwwwwrrgaTAATTAyytwwww+	+WWWWARRTAATTATCYYWWWWW+
JASPAR_2022_urochordates_UNVALIDATED_m83_MA1924_1	Tlx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.18	1001	++WWWWWWWTTAATTRWWWWWW++	++wwwwwwyAATTAAwwwwwww++
JASPAR_2022_urochordates_UNVALIDATED_m32_MA1873_1	FoxQ	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	5.52	1001	++++wwwwwwwGTTTATwwwwwww	WWWWWWWATAAACWWWWWWW++++
JASPAR_2022_urochordates_UNVALIDATED_m51_MA1892_1	Klf5-like	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	6.69	1001	+cccssccACGCCChmmcccc++	++GGGGKKDGGGCGTGGSSGGG+
JASPAR_2022_urochordates_UNVALIDATED_m21_MA1862_1	FoxD-b	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	7.05	1001	+++wwdtkwwTGTTTatwtwdkt+	+AMHWAWATAAACAWWMAHWW+++
JASPAR_2022_urochordates_UNVALIDATED_m100_UN0452_1	Glis	cluster_2	JASPAR_2022_urochordates_UNVALIDATED	23	6.77	1001	+mmmmmmmgmCCCCCCccvvmsm	KSKBBGGGGGGGGKCKKKKKKK+
JASPAR_2022_urochordates_UNVALIDATED_m66_MA1907_1	Otp	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	7.75	1001	++wwwwwawTTAATTaawtwww++	++WWWAWTTAATTAAWTWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m75_MA1916_1	SoxB2	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	6.45	1001	+wwwwkyyATTGTTttytttw+++	+++WAAARAAAACAATRRMWWWW+
JASPAR_2022_urochordates_UNVALIDATED_m6_MA1847_1	Bsx	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.57	1001	+++wakgmswTAATTGsybwwww+	+WWWWVRSCAATTAWSKCMTW+++
JASPAR_2022_urochordates_UNVALIDATED_m82_MA1923_1	Tcf3-4-12	cluster_10	JASPAR_2022_urochordates_UNVALIDATED	21	6.66	1001	YRGGTGRCAGGTGKSASSYG+	+crsstsmCACCTGycaccyr
JASPAR_2022_urochordates_UNVALIDATED_m84_MA1925_1	Uncx-b	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.54	1001	++wwwwwawTTAATTwwwtwww++	++WWWAWWWAATTAAWTWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m119_UN0471_1	Tef-Hlf	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	7.74	1001	+TWTTTKRTTACGTAAYMWWW++	++wwwkrTTACGTAAymaaawa+
JASPAR_2022_urochordates_UNVALIDATED_m1_MA0118_1	Macho-1	cluster_34	JASPAR_2022_urochordates_UNVALIDATED	9	5.18	42	ygGGkGkym	KRMCMCCCR
JASPAR_2022_urochordates_UNVALIDATED_m95_UN0447_1	E2f1/2/3/6	cluster_28	JASPAR_2022_urochordates_UNVALIDATED	20	6.32	1001	sssgmgcGCGCGCgckcsss	SSSGMGCGCGCGCGCKCSSS
JASPAR_2022_urochordates_UNVALIDATED_m19_MA1860_1	FoxA-b	cluster_11	JASPAR_2022_urochordates_UNVALIDATED	22	6.47	1001	wwdwdyaAATATTTrywywwww	WWWWRWRYAAATATTTRHWHWW
JASPAR_2022_urochordates_UNVALIDATED_m55_MA1896_1	Lmx-b	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.89	1001	++wwwwwaatTAATTaawtwww++	++WWWAWTTAATTAATTWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m54_MA1895_1	Lhx3/4	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.15	1001	++wwwwwwaTTAATTaawwwww++	++WWWWWTTAATTAATWWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m41_MA1882_1	Hnf1	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	6.66	1001	++wwwwwaatTAATTrvwwwww++	++WWWWWBYAATTAATTWWWWW++
JASPAR_2022_urochordates_UNVALIDATED_m112_UN0464_1	Pax6	cluster_1	JASPAR_2022_urochordates_UNVALIDATED	24	5.32	1001	++wrwttrrTTAATTrrkywww++	++WWWRMYYAATTAAYYAAWYW++
JASPAR_2022_urochordates_UNVALIDATED_m105_UN0457_1	Nfil3-b	cluster_9	JASPAR_2022_urochordates_UNVALIDATED	23	9.42	1001	+krarykrTTACGTAAymryy++	++RRYKRTTACGTAAYMRYTYM+
JASPAR_2022_urochordates_UNVALIDATED_m27_MA1868_1	FoxI-c	cluster_4	JASPAR_2022_urochordates_UNVALIDATED	24	5.50	1001	++rhskaskATGTTTtkwbkkr++	++YMMVWMAAAACATMSTMSDY++
JASPAR_2022_urochordates_UNVALIDATED_m117_UN0469_1	Six1-2	cluster_8	JASPAR_2022_urochordates_UNVALIDATED	20	5.16	1001	hgwaahaTGATACccwahmc	GKDTWGGGTATCATDTTWCD
JASPAR_2022_urochordates_UNVALIDATED_m106_UN0458_1	Nkx2-3-5-6	cluster_17	JASPAR_2022_urochordates_UNVALIDATED	20	6.86	1001	kkdkbtyAAGTGgyyyttww	WWAARRRCCACTTRAVMHMM
JASPAR_2022_urochordates_UNVALIDATED_m125_UN0477_1	ZF-C2H2-10	cluster_18	JASPAR_2022_urochordates_UNVALIDATED	22	7.68	1001	mmhmmmcATAGAaAtmmyatwh	DWATRKKATTTCTATGKKKDKK

Click on the column names to change the order of the data.
Write the name of one cluster, collection or a pattern in the Search window.

Heatmap View

Additional Files

Exported files

File	Description
Pairwise comparison	This table shows the pairwise comparison between all the input motifs using different metrics. This is the compare-matrices result.
Matrix description	This table shows information of each input motif.
Cluster-wise Motif Files [zip]	One TRANSFAC file is generated for each cluster including all the input motifs grouped in the corresponding cluster.
Root motifs	A file with the root matrix of each cluster.
Motif collections per cluster	A tab separated file containing the counts of motif of each collection on each cluster.
Clusters	A tab separated file containing the clusters and their correspondng motifs.
Central motifs IDs	A tab separated file containing the central motif, that one who is the most similar to all the others motif in the same cluster.
Central motifs (in TRANSFAC format)	A transfac file containing the central motif, that one who is the most similar to all the others motif within the same cluster.
Input motifs	The input motifs analyzed with matrix-clustering.

References
1. Castro-Mondragon JA et al. RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections. doi: 10.1093/nar/gkx314; Nucleic Acids Research (2017)
2. Last RSAT release: Nguyen NTT et al. RSAT 2018: regulatory sequence analysis tools 20th anniversary. Nucleic Acids Research (2018).
Additional Information
- Jacques van Helden course
Contact
- Jaime Castro-Mondragon - j.a.c.mondragon@ncmm.uio.no
- Morgane Thomas-Chollier - mthomas@biologie.ens.fr
- Jacques van Helden - Jacques.van-Helden@univ-amu.fr

RSAT - matrix-clustering result

Analysis: JASPAR_2022_urochordates_UNVALIDATED (04/10/2021 19:33)

Command

Results Summary

Clusters Summary Table

Individual Cluster View

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Branch Motifs

Definitions

Individual Motif View

Heatmap View

Exported files