MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0143.4 SOX2 letter-probability matrix: alength= 4 w= 11 nsites= 85754 E= 0 0.339401 0.128752 0.249948 0.281899 0.353091 0.176715 0.200072 0.270122 0.973890 0.005084 0.004874 0.016151 0.015241 0.913730 0.014495 0.056534 0.951408 0.014052 0.006414 0.028127 0.942522 0.020314 0.023346 0.013819 0.056149 0.008536 0.010845 0.924470 0.115750 0.009329 0.855610 0.019311 0.172260 0.073046 0.634536 0.120158 0.336544 0.200084 0.207162 0.256210 0.337710 0.203781 0.186557 0.271952 URL http://jaspar.genereg.net/matrix/MA0143.4 MOTIF MA0866.1 SOX21 letter-probability matrix: alength= 4 w= 15 nsites= 16194 E= 0 0.976041 0.005125 0.012289 0.006546 0.863905 0.013664 0.109751 0.012680 0.000945 0.995779 0.001764 0.001512 0.998106 0.000442 0.001389 0.000063 0.995654 0.000819 0.003528 0.000000 0.000379 0.000189 0.001893 0.997539 0.022017 0.000949 0.608883 0.368151 0.120777 0.080413 0.499873 0.298937 0.008098 0.456852 0.004618 0.530431 0.996156 0.001260 0.002521 0.000063 0.004030 0.000567 0.675924 0.319479 0.005256 0.000939 0.004818 0.988988 0.000632 0.000253 0.998610 0.000505 0.002076 0.001070 0.002328 0.994526 0.016072 0.045510 0.027882 0.910536 URL http://jaspar.genereg.net/matrix/MA0866.1 MOTIF MA0867.1 SOX4 letter-probability matrix: alength= 4 w= 16 nsites= 546 E= 0 0.252747 0.126374 0.472527 0.148352 1.000000 0.000000 0.000000 0.000000 0.990942 0.000000 0.009058 0.000000 0.000000 1.000000 0.000000 0.000000 0.998175 0.000000 0.001825 0.000000 0.992740 0.000000 0.005445 0.001815 0.000000 0.000000 0.001825 0.998175 0.000000 0.000000 0.019713 0.980287 0.084375 0.060937 0.621875 0.232813 0.000000 1.000000 0.000000 0.000000 0.998175 0.000000 0.001825 0.000000 0.000000 0.000000 0.956294 0.043706 0.000000 0.000000 0.007260 0.992740 0.001825 0.000000 0.998175 0.000000 0.000000 0.001825 0.000000 0.998175 0.003630 0.001815 0.001815 0.992740 URL http://jaspar.genereg.net/matrix/MA0867.1 MOTIF MA0867.2 SOX4 letter-probability matrix: alength= 4 w= 10 nsites= 12829 E= 0 0.248655 0.138047 0.435108 0.178190 0.619465 0.105538 0.227167 0.047830 0.998390 0.000000 0.000000 0.001610 0.000000 0.987615 0.006546 0.005839 0.998748 0.000179 0.001074 0.000000 0.996964 0.001072 0.001965 0.000000 0.658954 0.014166 0.005902 0.320977 0.150882 0.009486 0.827331 0.012302 0.291585 0.198105 0.486069 0.024241 0.317986 0.257614 0.338409 0.085991 URL http://jaspar.genereg.net/matrix/MA0867.2 MOTIF UN0137.1 SOX7 letter-probability matrix: alength= 4 w= 13 nsites= 21383 E= 0 0.790207 0.052659 0.062105 0.095029 0.000000 0.991724 0.000000 0.008276 0.940813 0.028619 0.000612 0.029955 0.884012 0.085016 0.021660 0.009313 0.003592 0.000000 0.001296 0.995112 0.252175 0.080784 0.453808 0.213233 0.264544 0.230810 0.242587 0.262058 0.207848 0.448778 0.079896 0.263479 0.993824 0.000529 0.000823 0.004823 0.009420 0.025086 0.086083 0.879411 0.029223 0.000223 0.028219 0.942335 0.007732 0.001347 0.989691 0.001230 0.091015 0.060832 0.062320 0.785834 URL http://jaspar.genereg.net/matrix/UN0137.1 MOTIF MA0868.1 SOX8 letter-probability matrix: alength= 4 w= 16 nsites= 467 E= 0 0.985011 0.000000 0.000000 0.014989 1.000000 0.000000 0.000000 0.000000 0.002169 0.997831 0.000000 0.000000 0.995671 0.000000 0.004329 0.000000 0.993521 0.002160 0.002160 0.002160 0.000000 0.000000 0.002169 0.997831 0.321429 0.013889 0.591270 0.073413 0.002169 0.000000 0.000000 0.997831 0.056497 0.077213 0.698682 0.167608 0.000000 0.991379 0.004310 0.004310 1.000000 0.000000 0.000000 0.000000 0.002160 0.000000 0.993521 0.004320 0.000000 0.000000 0.002169 0.997831 0.000000 0.000000 1.000000 0.000000 0.002169 0.000000 0.000000 0.997831 0.000000 0.008621 0.000000 0.991379 URL http://jaspar.genereg.net/matrix/MA0868.1 MOTIF MA0868.2 SOX8 letter-probability matrix: alength= 4 w= 10 nsites= 4529 E= 0 0.403400 0.248178 0.188563 0.159859 0.208333 0.116554 0.514358 0.160755 0.741778 0.061307 0.106780 0.090134 0.975962 0.000000 0.000000 0.024038 0.001550 0.944186 0.018088 0.036176 0.991319 0.000000 0.000000 0.008681 0.958552 0.022560 0.000000 0.018888 0.126623 0.016698 0.009276 0.847403 0.368679 0.056552 0.496737 0.078032 0.164294 0.230559 0.499452 0.105696 URL http://jaspar.genereg.net/matrix/MA0868.2 MOTIF MA0077.1 SOX9 letter-probability matrix: alength= 4 w= 9 nsites= 76 E= 0 0.039474 0.723684 0.118421 0.118421 0.105263 0.500000 0.078947 0.315789 0.934211 0.013158 0.000000 0.052632 0.026316 0.013158 0.026316 0.934211 0.092105 0.000000 0.052632 0.855263 0.026316 0.026316 0.947368 0.000000 0.171053 0.000000 0.052632 0.776316 0.118421 0.092105 0.078947 0.710526 0.184211 0.407895 0.092105 0.315789 URL http://jaspar.genereg.net/matrix/MA0077.1 MOTIF MA0079.1 SP1 letter-probability matrix: alength= 4 w= 10 nsites= 8 E= 0 0.125000 0.125000 0.500000 0.250000 0.250000 0.125000 0.500000 0.125000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.625000 0.250000 0.125000 0.250000 0.000000 0.500000 0.250000 0.000000 0.125000 0.625000 0.250000 0.000000 0.000000 0.750000 0.250000 0.125000 0.125000 0.750000 0.000000 0.250000 0.000000 0.000000 0.750000 URL http://jaspar.genereg.net/matrix/MA0079.1 MOTIF MA0079.2 SP1 letter-probability matrix: alength= 4 w= 10 nsites= 35 E= 0 0.000000 0.914286 0.028571 0.057143 0.000000 0.857143 0.028571 0.114286 0.000000 1.000000 0.000000 0.000000 0.114286 0.771429 0.000000 0.114286 0.057143 0.142857 0.428571 0.371429 0.000000 0.800000 0.028571 0.171429 0.028571 0.885714 0.000000 0.085714 0.000000 0.685714 0.085714 0.228571 0.171429 0.714286 0.000000 0.114286 0.085714 0.742857 0.085714 0.085714 URL http://jaspar.genereg.net/matrix/MA0079.2