MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0799.1 RFX4 letter-probability matrix: alength= 4 w= 16 nsites= 11648 E= 0 0.188530 0.356885 0.247854 0.206731 0.122698 0.000923 0.863017 0.013362 0.028489 0.025962 0.013869 0.931680 0.329752 0.136430 0.006103 0.527715 0.308716 0.033928 0.488081 0.169275 0.000273 0.849863 0.001641 0.148222 0.000081 0.715234 0.003643 0.281043 0.789132 0.065423 0.071538 0.073907 0.054798 0.037706 0.029699 0.877797 0.163528 0.003777 0.832639 0.000056 0.236091 0.029564 0.728686 0.005659 0.120666 0.518415 0.008825 0.352094 0.563666 0.008033 0.112910 0.315390 0.965237 0.014041 0.018302 0.002421 0.003614 0.961892 0.001205 0.033290 0.161005 0.278538 0.411286 0.149171 URL http://jaspar.genereg.net/matrix/MA0799.1 MOTIF MA0799.2 RFX4 letter-probability matrix: alength= 4 w= 17 nsites= 874 E= 0 0.123570 0.383295 0.240275 0.252860 0.074496 0.439965 0.326906 0.158633 0.005669 0.001134 0.992063 0.001134 0.001129 0.007901 0.003386 0.987585 0.013919 0.048180 0.001071 0.936831 0.039871 0.007543 0.942888 0.009698 0.000000 0.993190 0.003405 0.003405 0.006726 0.486547 0.012332 0.494395 0.393578 0.098165 0.100000 0.408257 0.512907 0.012346 0.469136 0.005612 0.002273 0.003409 0.994318 0.000000 0.008621 0.942888 0.009698 0.038793 0.940860 0.001075 0.046237 0.011828 0.988701 0.003390 0.006780 0.001130 0.001135 0.993190 0.000000 0.005675 0.148444 0.322667 0.454222 0.074667 0.255149 0.231121 0.395881 0.117849 URL http://jaspar.genereg.net/matrix/MA0799.2 MOTIF MA0510.1 RFX5 letter-probability matrix: alength= 4 w= 15 nsites= 3868 E= 0 0.088676 0.406412 0.145036 0.359876 0.153826 0.205791 0.222854 0.417528 0.001551 0.483454 0.331696 0.183299 0.046794 0.953206 0.000000 0.000000 0.307394 0.561272 0.015770 0.115564 0.000000 0.215098 0.000000 0.784902 0.476732 0.000259 0.523009 0.000000 0.063340 0.000000 0.908480 0.028180 0.000000 0.727766 0.105481 0.166753 0.790331 0.128490 0.081179 0.000000 0.954498 0.045502 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.538780 0.202172 0.000000 0.259049 0.247156 0.093330 0.564633 0.094881 0.225181 0.358842 0.320321 0.095657 URL http://jaspar.genereg.net/matrix/MA0510.1 MOTIF MA0510.2 RFX5 letter-probability matrix: alength= 4 w= 16 nsites= 2632 E= 0 0.105243 0.408435 0.300152 0.186170 0.030843 0.000000 0.966073 0.003084 0.001354 0.011171 0.005078 0.982397 0.015682 0.032699 0.003337 0.948282 0.301949 0.029790 0.616035 0.052225 0.001206 0.955788 0.015273 0.027733 0.000351 0.742897 0.002455 0.254297 0.885679 0.017334 0.019397 0.077590 0.046542 0.018100 0.007111 0.928248 0.249589 0.003612 0.744171 0.002627 0.050088 0.016813 0.933100 0.000000 0.051577 0.598516 0.022635 0.327273 0.933218 0.004308 0.042654 0.019819 0.979574 0.009325 0.007105 0.003996 0.010467 0.957729 0.004831 0.026973 0.181675 0.349980 0.355879 0.112466 URL http://jaspar.genereg.net/matrix/MA0510.2 MOTIF MA1554.1 RFX7 letter-probability matrix: alength= 4 w= 9 nsites= 285 E= 0 0.000000 0.575439 0.221053 0.203509 0.000000 0.007117 0.992883 0.000000 0.000000 0.079208 0.000000 0.920792 0.000000 0.088235 0.000000 0.911765 0.230583 0.000000 0.677184 0.092233 0.005970 0.832836 0.104478 0.056716 0.000000 0.393836 0.044521 0.561644 0.645833 0.050926 0.240741 0.062500 0.132616 0.379928 0.096774 0.390681 URL http://jaspar.genereg.net/matrix/MA1554.1 MOTIF MA0366.1 RGM1 letter-probability matrix: alength= 4 w= 5 nsites= 100 E= 0 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.110000 0.120000 0.770000 0.000000 URL http://jaspar.genereg.net/matrix/MA0366.1 MOTIF MA0367.1 RGT1 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 0 0.420000 0.130000 0.230000 0.220000 0.340000 0.100000 0.340000 0.220000 0.370000 0.000000 0.000000 0.630000 0.217822 0.019802 0.000000 0.762376 0.270000 0.150000 0.170000 0.410000 0.300000 0.180000 0.040000 0.480000 0.000000 0.120000 0.000000 0.880000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.039604 0.000000 0.881188 0.079208 0.320000 0.130000 0.330000 0.220000 URL http://jaspar.genereg.net/matrix/MA0367.1 MOTIF MA0719.1 RHOXF1 letter-probability matrix: alength= 4 w= 8 nsites= 10916 E= 0 0.295346 0.242213 0.169934 0.292506 0.199354 0.000000 0.033589 0.767058 0.451274 0.000000 0.437434 0.111292 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.324295 0.675705 0.000000 1.000000 0.000000 0.000000 0.000000 0.827534 0.000000 0.172466 0.295255 0.316325 0.193936 0.194485 URL http://jaspar.genereg.net/matrix/MA0719.1 MOTIF UN0134.1 RHOXF2 letter-probability matrix: alength= 4 w= 8 nsites= 13869 E= 0 0.163602 0.376307 0.153868 0.306223 0.000000 0.000000 0.000000 1.000000 0.975730 0.000000 0.024270 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.094825 0.905175 0.007699 0.970813 0.021488 0.000000 0.000000 0.938684 0.016378 0.044938 0.214147 0.386762 0.178528 0.220564 URL http://jaspar.genereg.net/matrix/UN0134.1 MOTIF MA0368.1 RIM101 letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 0 0.090000 0.430000 0.090000 0.390000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 URL http://jaspar.genereg.net/matrix/MA0368.1