MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0712.1 OTX2 letter-probability matrix: alength= 4 w= 8 nsites= 28028 E= 0 0.215891 0.244256 0.087520 0.452333 0.033328 0.004668 0.000000 0.962004 0.941833 0.001445 0.012097 0.044625 1.000000 0.000000 0.000000 0.000000 0.012005 0.002012 0.076604 0.909380 0.034239 0.903633 0.022536 0.039591 0.027983 0.716920 0.041693 0.213403 0.091801 0.271193 0.294705 0.342301 URL http://jaspar.genereg.net/matrix/MA0712.1 MOTIF MA0712.2 OTX2 letter-probability matrix: alength= 4 w= 12 nsites= 120679 E= 0 0.352431 0.202562 0.183329 0.261678 0.324547 0.143588 0.263716 0.268149 0.307883 0.044100 0.462500 0.185517 0.045037 0.006853 0.925936 0.022175 0.024180 0.013424 0.943346 0.019051 0.964633 0.018396 0.005850 0.011120 0.006339 0.004955 0.006521 0.982184 0.015852 0.014675 0.011659 0.957814 0.951267 0.005270 0.010789 0.032673 0.255620 0.102313 0.434864 0.207203 0.329817 0.211130 0.225002 0.234051 0.298362 0.170891 0.247052 0.283695 URL http://jaspar.genereg.net/matrix/MA0712.2 MOTIF MA1544.1 OVOL1 letter-probability matrix: alength= 4 w= 14 nsites= 15006 E= 0 0.412635 0.168599 0.200920 0.217846 0.472251 0.024957 0.269335 0.233457 0.419768 0.041449 0.174263 0.364520 0.857731 0.022235 0.000000 0.120034 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000067 0.000000 0.999667 0.000266 0.000000 0.000000 0.000266 0.999734 0.000000 0.000000 0.000000 1.000000 0.999401 0.000599 0.000000 0.000000 0.039315 0.238414 0.101906 0.620365 0.223577 0.246235 0.227576 0.302612 0.094102 0.384517 0.030453 0.490928 0.194789 0.262295 0.324670 0.218246 URL http://jaspar.genereg.net/matrix/MA1544.1 MOTIF MA1545.1 OVOL2 letter-probability matrix: alength= 4 w= 13 nsites= 12491 E= 0 0.322232 0.082700 0.364743 0.230326 0.284271 0.097789 0.241591 0.376349 0.610905 0.110149 0.030941 0.248006 0.000240 0.997843 0.001917 0.000000 0.000000 0.996728 0.003272 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.100914 0.000000 0.899086 0.000000 0.000000 0.000720 0.999280 0.987041 0.001027 0.011932 0.000000 0.104444 0.317096 0.193719 0.384741 0.259627 0.208710 0.271796 0.259867 0.163014 0.343666 0.105063 0.388257 0.213994 0.251701 0.309983 0.224322 URL http://jaspar.genereg.net/matrix/MA1545.1 MOTIF MA0198.1 OdsH letter-probability matrix: alength= 4 w= 7 nsites= 22 E= 0 0.000000 0.500000 0.181818 0.318182 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.590909 0.000000 0.363636 0.045455 URL http://jaspar.genereg.net/matrix/MA0198.1 MOTIF MA1997.1 Olig2 letter-probability matrix: alength= 4 w= 10 nsites= 61142 E= 0 0.309574 0.244889 0.270518 0.175019 0.278139 0.300252 0.322037 0.099571 0.000164 0.997154 0.001865 0.000818 0.976955 0.010925 0.012119 0.000000 0.000229 0.000294 0.998806 0.000671 0.000671 0.998806 0.000294 0.000229 0.000000 0.012119 0.010925 0.976955 0.000818 0.001865 0.997154 0.000164 0.099571 0.322037 0.300252 0.278139 0.175019 0.270518 0.244889 0.309574 URL http://jaspar.genereg.net/matrix/MA1997.1 MOTIF MA0199.1 Optix letter-probability matrix: alength= 4 w= 5 nsites= 27 E= 0 0.000000 0.185185 0.000000 0.814815 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.962963 0.000000 0.037037 0.000000 URL http://jaspar.genereg.net/matrix/MA0199.1 MOTIF MA1034.1 Os05g0497200 letter-probability matrix: alength= 4 w= 8 nsites= 999 E= 0 0.003003 0.990991 0.003003 0.003003 0.003003 0.003003 0.990991 0.003003 0.003003 0.661662 0.332332 0.003003 0.003003 0.990991 0.003003 0.003003 0.003003 0.003003 0.990991 0.003003 0.003003 0.990991 0.003003 0.003003 0.003003 0.990991 0.003003 0.003003 0.495000 0.005000 0.495000 0.005000 URL http://jaspar.genereg.net/matrix/MA1034.1 MOTIF MA1050.1 OsI_08196 letter-probability matrix: alength= 4 w= 8 nsites= 1001 E= 0 0.000999 0.000999 0.945055 0.052947 0.046046 0.000000 0.953954 0.000000 0.091091 0.091091 0.726727 0.091091 0.000000 0.863000 0.046000 0.091000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.899900 0.050050 0.050050 0.000000 0.001000 0.855000 0.072000 0.072000 URL http://jaspar.genereg.net/matrix/MA1050.1 MOTIF MA1409.1 OsRR22 letter-probability matrix: alength= 4 w= 10 nsites= 100000 E= 0 0.512570 0.113810 0.117710 0.255910 0.868700 0.030420 0.060410 0.040470 0.004860 0.005220 0.976700 0.013220 0.979070 0.002870 0.007780 0.010280 0.004950 0.004840 0.005100 0.985110 0.723957 0.077241 0.004640 0.194162 0.004440 0.916480 0.006110 0.072970 0.016900 0.028380 0.926339 0.028380 0.139260 0.331450 0.467560 0.061730 0.204678 0.113559 0.055109 0.626654 URL http://jaspar.genereg.net/matrix/MA1409.1